[Nyororin]

I have tried really hard to think of any decent ones that are still around, but seriously... Arcade culture has really changed in the last 8 to 10 years.
There used to be a really great arcade taking up the second floor of a large shopping center next to Toyodahonmachi station (Minami-ku), but I am not even sure it is still around these days.

You`ll find all the newest stuff and more game type games (not slot or quiz / ikusei) in shopping centers now. You`ll probably find the type of stuff closest to what you`re looking for in Aeon. They don`t have to worry as much about securing repeat customers or keeping people in there for a long time as they have such a high flow anyway, so most of the space is dedicated to actual games. They look small when you`re shopping and walk by the entrance, but are huge in reality. They`re always shaped sort of like a funnel, with the smallest point facing outward.